5VM5		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	0JO, NA, PLS	enzyme
Gene Ontology	Chain Function Process Component B, D, A, C
Primary reference	Directed evolution mimics allosteric activation by stepwise tuning of the conformational ensemble., Buller AR, van Roye P, Cahn JKB, Scheele RA, Herger M, Arnold FH, J Am Chem Soc. 2018 Apr 30. doi: 10.1021/jacs.8b03490. PMID:29712420

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (487 Kb) [Save to disk] Biological Unit Coordinates (5vm5.pdb1.gz) 240 Kb Biological Unit Coordinates (5vm5.pdb2.gz) 242 Kb LPC: Ligand-Protein Contacts for 5VM5 CSU: Contacts of Structural Units for 5VM5 Structure Factors (4647 Kb) Retrieve 5VM5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VM5 from S2C, [Save to disk] Re-refined 5vm5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5VM5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vm5] [5vm5_A] [5vm5_B] [5vm5_C] [5vm5_D] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---