5VOM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 9GY enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceDesign and Optimization of Benzopiperazines as Potent Inhibitors of BET Bromodomains., Millan DS, Kayser-Bricker KJ, Martin MW, Talbot AC, Schiller SER, Herbertz T, Williams GL, Luke GP, Hubbs S, Alvarez Morales MA, Cardillo D, Troccolo P, Mendes RL, McKinnon C, ACS Med Chem Lett. 2017 Jul 14;8(8):847-852. doi: 10.1021/acsmedchemlett.7b00191., eCollection 2017 Aug 10. PMID:28835800
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (5vom.pdb1.gz) 25 Kb
  • Biological Unit Coordinates (5vom.pdb2.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 5VOM
  • CSU: Contacts of Structural Units for 5VOM
  • Structure Factors (758 Kb)
  • Retrieve 5VOM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VOM from S2C, [Save to disk]
  • Re-refined 5vom structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 5VOM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vom_A] [5vom_B]
  • SWISS-PROT database:

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