5VQ5 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand IOD, MSE enzyme
Gene OK10 ; WM48
Primary referenceSelective depletion of uropathogenic E. coli from the gut by a FimH antagonist., Spaulding CN, Klein RD, Ruer S, Kau AL, Schreiber HL, Cusumano ZT, Dodson KW, Pinkner JS, Fremont DH, Janetka JW, Remaut H, Gordon JI, Hultgren SJ, Nature. 2017 Jun 22;546(7659):528-532. doi: 10.1038/nature22972. Epub 2017 Jun, 14. PMID:28614296
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk]
  • Biological Unit Coordinates (5vq5.pdb1.gz) 67 Kb
  • Biological Unit Coordinates (5vq5.pdb2.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 5VQ5
  • CSU: Contacts of Structural Units for 5VQ5
  • Structure Factors (1374 Kb)
  • Retrieve 5VQ5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VQ5 from S2C, [Save to disk]
  • Re-refined 5vq5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5VQ5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vq5] [5vq5_A] [5vq5_B]
  • SWISS-PROT database:

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