5VQM		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component A, B C, L
Primary reference	A neutralizing antibody that blocks delivery of the enzymatic cargo of Clostridium difficile toxin TcdB into host cells., Kroh HK, Chandrasekaran R, Zhang Z, Rosenthal K, Woods R, Jin X, Nyborg AC, Rainey GJ, Warrener P, Melnyk RA, Spiller BW, Lacy DB, J Biol Chem. 2017 Nov 27. pii: M117.813428. doi: 10.1074/jbc.M117.813428. PMID:29180448

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (940 Kb) [Save to disk] Biological Unit Coordinates (5vqm.pdb1.gz) 466 Kb Biological Unit Coordinates (5vqm.pdb2.gz) 468 Kb CSU: Contacts of Structural Units for 5VQM Structure Factors (1058 Kb) Retrieve 5VQM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VQM from S2C, [Save to disk]

View 5VQM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vqm_C] [5vqm_D] [5vqm_H] [5vqm_L] [5vqm_A] [5vqm_B] SWISS-PROT database:

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