5VR6 Hydrolase date May 10, 2017
title Structure Of Human Sts-1 Histidine Phosphatase Domain With S Bound
authors W.Zhou, Y.Yin, A.W.Weinheimer, N.Kaur, N.Carpino, J.B.French
compound source
Molecule: Ubiquitin-Associated And Sh3 Domain-Containing Pr
Chain: A, B
Fragment: Unp Residues 384-649
Synonym: Cbl-Interacting Protein P70,Suppressor Of T-Cell R Signaling 1,Sts-1,T-Cell Ubiquitin Ligand 2,Tula-2,Tyrosine Phosphatase Sts1tula2;
Ec: 3.1.3.48
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ubash3b, Kiaa1959, Sts1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.194 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.640 79.160 105.102 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.87 Å
ligand SO4 enzyme Hydrolase E.C.3.1.3.48 BRENDA
Primary referenceStructural and functional characterization of the histidine phosphatase domains of human Sts-1 and Sts-2., Zhou W, Yin Y, Weinheimer AS, Kaur N, Carpino N, French JB, Biochemistry. 2017 Jul 31. doi: 10.1021/acs.biochem.7b00638. PMID:28759203
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (5vr6.pdb1.gz) 90 Kb
  • LPC: Ligand-Protein Contacts for 5VR6
  • CSU: Contacts of Structural Units for 5VR6
  • Structure Factors (539 Kb)
  • Retrieve 5VR6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VR6 from S2C, [Save to disk]
    • View 5VR6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 5VR6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vr6_B] [5vr6_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 5VR6
  • Community annotation for 5VR6 at PDBWiki (http://pdbwiki.org)

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