5VVF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	EDO	enzyme
Primary reference	Asymmetric recognition of HIV-1 Envelope trimer by V1V2 loop-targeting antibodies., Wang H, Gristick HB, Scharf L, West AP, Galimidi RP, Seaman MS, Freund NT, Nussenzweig MC, Bjorkman PJ, Elife. 2017 May 26;6. pii: e27389. doi: 10.7554/eLife.27389. PMID:28548638

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (148 Kb) [Save to disk] Biological Unit Coordinates (5vvf.pdb1.gz) 140 Kb LPC: Ligand-Protein Contacts for 5VVF CSU: Contacts of Structural Units for 5VVF Structure Factors (1007 Kb) Retrieve 5VVF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VVF from S2C, [Save to disk]

View 5VVF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vvf_H] [5vvf_L] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---