5VYF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CA	enzyme
Gene Ontology	Chain Function Process Component F, C
Primary reference	Treating cat allergy with monoclonal IgG antibodies that bind allergen and prevent IgE engagement., Orengo JM, Radin AR, Kamat V, Badithe A, Ben LH, Bennett BL, Zhong S, Birchard D, Limnander A, Rafique A, Bautista J, Kostic A, Newell D, Duan X, Franklin MC, Olson W, Huang T, Gandhi NA, Lipsich L, Stahl N, Papadopoulos NJ, Murphy AJ, Yancopoulos GD, Nat Commun. 2018 Apr 12;9(1):1421. doi: 10.1038/s41467-018-03636-8. PMID:29650949

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (358 Kb) [Save to disk] Biological Unit Coordinates (5vyf.pdb1.gz) 177 Kb Biological Unit Coordinates (5vyf.pdb2.gz) 178 Kb LPC: Ligand-Protein Contacts for 5VYF CSU: Contacts of Structural Units for 5VYF Structure Factors (461 Kb) Retrieve 5VYF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5VYF from S2C, [Save to disk]

View 5VYF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5vyf_A] [5vyf_B] [5vyf_C] [5vyf_F] [5vyf_H] [5vyf_L] SWISS-PROT database:

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