5VYY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 9QY, EDO, FMT, MG, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure Based Design of a Grp94-Selective Inhibitor: Exploiting a Key Residue in Grp94 To Optimize Paralog-Selective Binding., Que NLS, Crowley VM, Duerfeldt AS, Zhao J, Kent CN, Blagg BSJ, Gewirth DT, J Med Chem. 2018 Apr 12;61(7):2793-2805. doi: 10.1021/acs.jmedchem.7b01608. Epub , 2018 Mar 20. PMID:29528635
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (5vyy.pdb1.gz) 67 Kb
  • Biological Unit Coordinates (5vyy.pdb2.gz) 132 Kb
  • LPC: Ligand-Protein Contacts for 5VYY
  • CSU: Contacts of Structural Units for 5VYY
  • Structure Factors (639 Kb)
  • Retrieve 5VYY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5VYY from S2C, [Save to disk]
  • View 5VYY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5vyy_A]
  • SWISS-PROT database:

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