5W30 Crystal structure of mutant CJ YCEI protein (CJ-N48C) with monobromobimane guest structure date
authors Huber, T.R., Snow, C.D.
compound source
symmetry
R_factor
R_Free 0.2457
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.75
ligand 9UM, SO4, UNL enzyme
Primary referenceInstalling Guest Molecules at Specific Sites within Scaffold Protein Crystals., Huber TR, McPherson EC, Keating CE, Snow CD, Bioconjug Chem. 2017 Dec 20. doi: 10.1021/acs.bioconjchem.7b00668. PMID:29232505
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (5w30.pdb1.gz) 113 Kb
  • LPC: Ligand-Protein Contacts for 5W30
  • CSU: Contacts of Structural Units for 5W30
  • Structure Factors (371 Kb)
  • Retrieve 5W30 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5W30 from S2C, [Save to disk]
  • View 5W30 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5W30
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5w30_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5W30
  • Community annotation for 5W30 at PDBWiki (http://pdbwiki.org)

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