5W8H	Oxidoreductase	date	Jun 21, 2017
title	Crystal Structure Of Lactate Dehydrogenase A In Complex With Compound 11
authors	C.M.Lukacs, D.M.Dranow
compound		source
Molecule: L-Lactate Dehydrogenase A Chain Chain: A, B, C, D Synonym: Ldh-A,Cell Proliferation-Inducing Gene 19 Protein, Subunit,Ldh-M,Renal Carcinoma Antigen Ny-Ren-59; Ec: 1.1.1.27 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ldha, Pig19 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid
symmetry	Space Group: C 1 2 1	R_factor 0.147 R_Free 0.181
crystal cell	length a length b length c angle alpha angle beta angle gamma 167.730 81.210 120.650 90.00 118.22 90.00
method	X-Ray Diffraction	resolution	1.80 Å
ligand	9Y1, ACT, DMS, GOL, MLA	enzyme	Oxidoreductase E.C.1.1.1.27 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Discovery and Optimization of Potent, Cell-Active Pyrazole-Based Inhibitors of Lactate Dehydrogenase (LDH)., Rai G, Brimacombe KR, Mott BT, Urban DJ, Hu X, Yang SM, Lee TD, Cheff DM, Kouznetsova J, Benavides GA, Pohida K, Kuenstner EJ, Luci DK, Lukacs CM, Davies DR, Dranow DM, Zhu H, Sulikowski G, Moore WJ, Stott GM, Flint AJ, Hall MD, Darley-Usmar VM, Neckers LM, Dang CV, Waterson AG, Simeonov A, Jadhav A, Maloney DJ, J Med Chem. 2017 Nov 22;60(22):9184-9204. doi: 10.1021/acs.jmedchem.7b00941. Epub, 2017 Nov 9. PMID:29120638

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (438 Kb) [Save to disk] Biological Unit Coordinates (5w8h.pdb1.gz) 429 Kb LPC: Ligand-Protein Contacts for 5W8H CSU: Contacts of Structural Units for 5W8H Structure Factors (2289 Kb) Retrieve 5W8H in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5W8H from S2C, [Save to disk]

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5w8h_D] [5w8h_A] [5w8h_B] [5w8h_C] SWISS-PROT database: Domain organization of by SWISSPFAM

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