5WIK Transferase date Jul 19, 2017
title Jak2 Pseudokinase In Complex With Bi-D1870
authors Q.Li, M.J.Eck, K.Li, E.Park
compound source
Molecule: Tyrosine-Protein Kinase Jak2
Chain: B
Fragment: Unp Residues 536-812
Synonym: Janus Kinase 2,Jak-2
Ec: 2.7.10.2
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Jak2
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
symmetry Space Group: P 21 21 21
R_factor 0.206 R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.125 60.844 89.724 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand 584 enzyme Transferase E.C.2.7.10.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceDiscovery and Structural Characterization of ATP-Site Ligands for the Wild-Type and V617F Mutant JAK2 Pseudokinase Domain., McNally R, Li Q, Li K, Dekker C, Vangrevelinghe E, Jones M, Chene P, Machauer R, Radimerski T, Eck MJ, ACS Chem Biol. 2019 Mar 11. doi: 10.1021/acschembio.8b00722. PMID:30763067
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (5wik.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 5WIK
  • CSU: Contacts of Structural Units for 5WIK
  • Structure Factors (269 Kb)
  • Retrieve 5WIK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5WIK from S2C, [Save to disk]
  • View 5WIK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5WIK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5wik_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5WIK
  • Community annotation for 5WIK at PDBWiki (http://pdbwiki.org)

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