5X4Z date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, P
  • RNA-directed 5'-3' RNA polym...


    • E, Q


    G, S


    H, T
  • RNA-directed 5'-3' RNA polym...


    • I, U


    M, A


    N, B


    O, C


    R, F
  • RNA-directed 5'-3' RNA polym...


    • V, J
  • RNA-directed 5'-3' RNA polym...


    • W, K
  • RNA-directed 5'-3' RNA polym...


    • X, L
  • RNA-directed 5'-3' RNA polym...


    • Primary referenceCrystal structure of RNA polymerase II from Komagataella pastoris., Ehara H, Umehara T, Sekine SI, Yokoyama S, Biochem Biophys Res Commun. 2017 May 27;487(2):230-235. doi:, 10.1016/j.bbrc.2017.04.039. Epub 2017 Apr 12. PMID:28412353
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1153 Kb) [Save to disk]
  • Biological Unit Coordinates (5x4z.pdb1.gz) 574 Kb
  • Biological Unit Coordinates (5x4z.pdb2.gz) 574 Kb
  • LPC: Ligand-Protein Contacts for 5X4Z
  • CSU: Contacts of Structural Units for 5X4Z
  • Structure Factors (77 Kb)
  • Retrieve 5X4Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5X4Z from S2C, [Save to disk]
  • Re-refined 5x4z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 5X4Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5x4z_X] [5x4z] [5x4z_N] [5x4z_A] [5x4z_M] [5x4z_B] [5x4z_O] [5x4z_C] [5x4z_P] [5x4z_D] [5x4z_Q] [5x4z_E] [5x4z_R] [5x4z_F] [5x4z_S] [5x4z_G] [5x4z_T] [5x4z_H] [5x4z_U] [5x4z_I] [5x4z_V] [5x4z_J] [5x4z_W] [5x4z_K] [5x4z_L]
  • SWISS-PROT database:

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