OCA Atlas for 5X66

5X66

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

MTX, UMP

enzyme

Gene
Ontology

Chain	Function	Process	Component
D, B, F, C, A, E	thymidylate synthase activit...

Primary reference

Structural analyses of human thymidylate synthase reveal a site that may control conformational switching between active and inactive states., Chen D, Jansson A, Sim D, Larsson A, Nordlund P, J Biol Chem. 2017 Aug 11;292(32):13449-13458. doi: 10.1074/jbc.M117.787267. Epub , 2017 Jun 20. PMID:28634233

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (305 Kb) [Save to disk]

Biological Unit Coordinates (5x66.pdb1.gz) 103 Kb

Biological Unit Coordinates (5x66.pdb2.gz) 102 Kb

Biological Unit Coordinates (5x66.pdb3.gz) 101 Kb

LPC: Ligand-Protein Contacts for 5X66

CSU: Contacts of Structural Units for 5X66

Structure Factors (2773 Kb)

Retrieve 5X66 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 5X66 from S2C, [Save to disk]

Re-refined 5x66 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 5X66 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5x66_A] [5x66_B] [5x66_C] [5x66_D] [5x66_E] [5x66_F]

SWISS-PROT database:

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