5XFM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A, C, D


Primary referenceA novel glycoside hydrolase family 97 enzyme: Bifunctional beta-l-arabinopyranosidase/alpha-galactosidase from Bacteroides thetaiotaomicron., Kikuchi A, Okuyama M, Kato K, Osaki S, Ma M, Kumagai Y, Matsunaga K, Klahan P, Tagami T, Yao M, Kimura A, Biochimie. 2017 Nov;142:41-50. doi: 10.1016/j.biochi.2017.08.003. Epub 2017 Aug, 10. PMID:28804002
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (429 Kb) [Save to disk]
  • Biological Unit Coordinates (5xfm.pdb1.gz) 111 Kb
  • Biological Unit Coordinates (5xfm.pdb2.gz) 109 Kb
  • Biological Unit Coordinates (5xfm.pdb3.gz) 111 Kb
  • Biological Unit Coordinates (5xfm.pdb4.gz) 110 Kb
  • LPC: Ligand-Protein Contacts for 5XFM
  • CSU: Contacts of Structural Units for 5XFM
  • Structure Factors (1059 Kb)
  • Retrieve 5XFM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5XFM from S2C, [Save to disk]
  • View 5XFM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5xfm_A] [5xfm_B] [5xfm_C] [5xfm_D]
  • SWISS-PROT database:

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