5XI5 Structural Protein date Apr 26, 2017
title Crystal Structure Of T2r-Ttl-Po5 Complex
authors Y.Chu, Y.Wang, J.Yang, W.Li
compound source
Molecule: Tubulin Alpha Chain
Chain: A, C
Organism_scientific: Sus Barbatus
Organism_common: Bearded Pig
Organism_taxid: 41807

Molecule: Tubulin Beta Chain
Chain: B, D

Organism_scientific: Sus Barbatus
Organism_common: Bearded Pig
Organism_taxid: 41807

Molecule: Stathmin-4
Chain: E
Fragment: Unp Residues 6-189
Synonym: Stathmin-Like Protein B3,Rb3
Engineered: Yes

Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
Gene: Stmn4
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Tubulin Tyrosine Ligase
Chain: F
Engineered: Yes

Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Gene: Ttl
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.227 R_Free 0.265
crystal
cell
length a length b length c angle alpha angle beta angle gamma
105.251 157.375 182.467 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.81 Å
ligand ACP, CA, GDP, GTP, MES, MG, PN6 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C
  • structural constituent of cy...


  • D, B
  • structural constituent of cy...


  • E


    F


    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (357 Kb) [Save to disk]
  • Biological Unit Coordinates (5xi5.pdb1.gz) 349 Kb
  • LPC: Ligand-Protein Contacts for 5XI5
  • CSU: Contacts of Structural Units for 5XI5
  • Structure Factors (2192 Kb)
  • Retrieve 5XI5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5XI5 from S2C, [Save to disk]
  • View 5XI5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5XI5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5xi5_F] [5xi5_C] [5xi5_D] [5xi5_B] [5xi5_A] [5xi5_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5XI5
  • Community annotation for 5XI5 at PDBWiki (http://pdbwiki.org)

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