5XYF	Protein Binding	date	Jul 07, 2017
title	Crystal Structure Of The Human Tin2-Tpp1-Trf2 Telomeric Comp
authors	C.Hu, Y.Chen
compound		source
Molecule: Terf1-Interacting Nuclear Factor 2 Chain: A Fragment: Unp Residues 2-202 Synonym: Trf1-Interacting Nuclear Protein 2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Tinf2, Tin2 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)
Molecule: Telomeric Repeat-Binding Factor 2 Chain: C Fragment: Unp Residues 392-408 Synonym: Ttaggg Repeat-Binding Factor 2,Telomeric Dna-Bindi Protein; Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Terf2, Trbf2, Trf2 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)
Molecule: Adrenocortical Dysplasia Protein Homolog Chain: B Fragment: Unp Residues 510-544 Synonym: Pot1 And Tin2-Interacting Protein Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Acd, Pip1, Ptop, Tint1, Tpp1 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)
symmetry	Space Group: C 2 2 21	R_factor 0.196 R_Free 0.227
crystal cell	length a length b length c angle alpha angle beta angle gamma 46.222 112.258 121.209 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	MSE	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structural and functional analyses of the mammalian TIN2-TPP1-TRF2 telomeric complex., Hu C, Rai R, Huang C, Broton C, Long J, Xu Y, Xue J, Lei M, Chang S, Chen Y, Cell Res. 2017 Dec;27(12):1485-1502. doi: 10.1038/cr.2017.144. Epub 2017 Nov 21. PMID:29160297

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk] Biological Unit Coordinates (5xyf.pdb1.gz) 79 Kb LPC: Ligand-Protein Contacts for 5XYF CSU: Contacts of Structural Units for 5XYF Structure Factors (158 Kb) Retrieve 5XYF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5XYF from S2C, [Save to disk]

View 5XYF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5XYF

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5xyf_C] [5xyf_A] [5xyf_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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