5Y3A		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	SO4	enzyme
Gene Ontology	Chain Function Process Component A, F C, H G, B I, D J, E
Primary reference	Structural basis for Ragulator functioning as a scaffold in membrane-anchoring of Rag GTPases and mTORC1., Zhang T, Wang R, Wang Z, Wang X, Wang F, Ding J, Nat Commun. 2017 Nov 9;8(1):1394. doi: 10.1038/s41467-017-01567-4. PMID:29123114

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (311 Kb) [Save to disk] Biological Unit Coordinates (5y3a.pdb1.gz) 154 Kb Biological Unit Coordinates (5y3a.pdb2.gz) 152 Kb LPC: Ligand-Protein Contacts for 5Y3A CSU: Contacts of Structural Units for 5Y3A Structure Factors (470 Kb) Retrieve 5Y3A in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5Y3A from S2C, [Save to disk]

View 5Y3A in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5y3a_A] [5y3a_B] [5y3a_C] [5y3a_D] [5y3a_E] [5y3a_F] [5y3a_G] [5y3a_H] [5y3a_I] [5y3a_J] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---