5Y3J		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MG, NAG	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Toll-like Receptor 9 Contains Two DNA Binding Sites that Function Cooperatively to Promote Receptor Dimerization and Activation., Ohto U, Ishida H, Shibata T, Sato R, Miyake K, Shimizu T, Immunity. 2018 Mar 24. pii: S1074-7613(18)30089-X. doi:, 10.1016/j.immuni.2018.03.013. PMID:29625894

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (551 Kb) [Save to disk] Biological Unit Coordinates (5y3j.pdb1.gz) 275 Kb Biological Unit Coordinates (5y3j.pdb2.gz) 271 Kb LPC: Ligand-Protein Contacts for 5Y3J CSU: Contacts of Structural Units for 5Y3J Structure Factors (7037 Kb) Retrieve 5Y3J in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5Y3J from S2C, [Save to disk]

View 5Y3J in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5y3j_A] [5y3j_B] [5y3j_C] [5y3j_D] [5y3j_E] [5y3j_F] SWISS-PROT database:

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