5YEF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
Primary referenceMolecular mechanism of directional CTCF recognition of a diverse range of genomic sites., Yin M, Wang J, Wang M, Li X, Zhang M, Wu Q, Wang Y, Cell Res. 2017 Nov;27(11):1365-1377. doi: 10.1038/cr.2017.131. Epub 2017 Oct 27. PMID:29076501
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (415 Kb) [Save to disk]
  • Biological Unit Coordinates (5yef.pdb1.gz) 103 Kb
  • Biological Unit Coordinates (5yef.pdb2.gz) 102 Kb
  • Biological Unit Coordinates (5yef.pdb3.gz) 102 Kb
  • Biological Unit Coordinates (5yef.pdb4.gz) 102 Kb
  • LPC: Ligand-Protein Contacts for 5YEF
  • CSU: Contacts of Structural Units for 5YEF
  • Structure Factors (1284 Kb)
  • Retrieve 5YEF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YEF from S2C, [Save to disk]
    • View 5YEF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5yef_A] [5yef_B] [5yef_C] [5yef_D] [5yef_E] [5yef_F] [5yef_G] [5yef_H] [5yef_I] [5yef_J] [5yef_K] [5yef_L]
  • SWISS-PROT database:

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