5YG4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 8UF, CL, GOL, PLG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A, C


Primary referencePotent Inhibitors of Plasmodial Serine Hydroxymethyltransferase (SHMT) Featuring a Spirocyclic Scaffold., Schwertz G, Witschel MC, Rottmann M, Leartsakulpanich U, Chitnumsub P, Jaruwat A, Amornwatcharapong W, Ittarat W, Schafer A, Aponte RA, Trapp N, Chaiyen P, Diederich F, ChemMedChem. 2018 May 8;13(9):931-943. doi: 10.1002/cmdc.201800053. Epub 2018 Apr, 14. PMID:29655285
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (222 Kb) [Save to disk]
  • Biological Unit Coordinates (5yg4.pdb1.gz) 146 Kb
  • Biological Unit Coordinates (5yg4.pdb2.gz) 145 Kb
  • LPC: Ligand-Protein Contacts for 5YG4
  • CSU: Contacts of Structural Units for 5YG4
  • Structure Factors (986 Kb)
  • Retrieve 5YG4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YG4 from S2C, [Save to disk]
  • View 5YG4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5yg4_A] [5yg4_B] [5yg4_C]
  • SWISS-PROT database:

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