5YGI		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	MG, PO4, T93	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	The Mevalonate Pathway Is a Druggable Target for Vaccine Adjuvant Discovery., Xia Y, Xie Y, Yu Z, Xiao H, Jiang G, Zhou X, Yang Y, Li X, Zhao M, Li L, Zheng M, Han S, Zong Z, Meng X, Deng H, Ye H, Fa Y, Wu H, Oldfield E, Hu X, Liu W, Shi Y, Zhang Y, Cell. 2018 Nov 1;175(4):1059-1073.e21. doi: 10.1016/j.cell.2018.08.070. Epub 2018, Sep 27. PMID:30270039

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk] Biological Unit Coordinates (5ygi.pdb1.gz) 116 Kb LPC: Ligand-Protein Contacts for 5YGI CSU: Contacts of Structural Units for 5YGI Structure Factors (214 Kb) Retrieve 5YGI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YGI from S2C, [Save to disk]

View 5YGI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5ygi_A] SWISS-PROT database:

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