5YIF		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	8VR	enzyme
Gene Ontology	Chain Function Process Component B, A
Primary reference	Identification and characterization of a novel beta-D-galactosidase that releases pyruvylated galactose., Higuchi Y, Matsufuji H, Tanuma M, Arakawa T, Mori K, Yamada C, Shofia R, Matsunaga E, Tashiro K, Fushinobu S, Takegawa K, Sci Rep. 2018 Aug 13;8(1):12013. doi: 10.1038/s41598-018-30508-4. PMID:30104607

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk] Biological Unit Coordinates (5yif.pdb1.gz) 78 Kb Biological Unit Coordinates (5yif.pdb2.gz) 78 Kb LPC: Ligand-Protein Contacts for 5YIF CSU: Contacts of Structural Units for 5YIF Structure Factors (1253 Kb) Retrieve 5YIF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YIF from S2C, [Save to disk]

View 5YIF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5yif_A] [5yif_B] SWISS-PROT database:

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