5YIK		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component A
Primary reference	Structural basis of ubiquitin modification by the Legionella effector SdeA., Dong Y, Mu Y, Xie Y, Zhang Y, Han Y, Zhou Y, Wang W, Liu Z, Wu M, Wang H, Pan M, Xu N, Xu CQ, Yang M, Fan S, Deng H, Tan T, Liu X, Liu L, Li J, Wang J, Fang X, Feng Y, Nature. 2018 May;557(7707):674-678. doi: 10.1038/s41586-018-0146-7. Epub 2018 May, 23. PMID:29795342

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (193 Kb) [Save to disk] Biological Unit Coordinates (5yik.pdb1.gz) 188 Kb CSU: Contacts of Structural Units for 5YIK Structure Factors (750 Kb) Retrieve 5YIK in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YIK from S2C, [Save to disk]

View 5YIK in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5yik_A] [5yik_C] [5yik_D] [5yik_F] SWISS-PROT database:

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