5YJ8		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	8W9, SO4	enzyme
Primary reference	Structural plasticity of the TDRD3 Tudor domain probed by a fragment screening hit., Liu J, Zhang S, Liu M, Liu Y, Nshogoza G, Gao J, Ma R, Yang Y, Wu J, Zhang J, Li F, Ruan K, FEBS J. 2018 Apr 12. doi: 10.1111/febs.14469. PMID:29645362

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (28 Kb) [Save to disk] Biological Unit Coordinates (5yj8.pdb1.gz) 23 Kb LPC: Ligand-Protein Contacts for 5YJ8 CSU: Contacts of Structural Units for 5YJ8 Structure Factors (132 Kb) Retrieve 5YJ8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YJ8 from S2C, [Save to disk]

View 5YJ8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5yj8_A] SWISS-PROT database:

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