5YKO		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	M3L, NI, OGA, ZN	enzyme
Primary reference	Structure of the Arabidopsis JMJ14-H3K4me3 Complex Provides Insight into the Substrate Specificity of KDM5 Subfamily Histone Demethylases., Yang Z, Qiu Q, Chen W, Jia B, Chen X, Hu H, He K, Deng X, Li S, Tao WA, Cao X, Du J, Plant Cell. 2017 Dec 12. pii: tpc.17.00666. doi: 10.1105/tpc.17.00666. PMID:29233856

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (171 Kb) [Save to disk] Biological Unit Coordinates (5yko.pdb1.gz) 165 Kb LPC: Ligand-Protein Contacts for 5YKO CSU: Contacts of Structural Units for 5YKO Structure Factors (236 Kb) Retrieve 5YKO in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5YKO from S2C, [Save to disk]

View 5YKO in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5yko_A] [5yko_P] SWISS-PROT database:

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