5YLV date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 8WX, BFD, CE1, MG, NAG, PCW, RB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • potassium-transporting ATPas...
  • potassium:proton exchanging ...


  • B
  • ATPase activator activity
  • sodium:potassium-exchanging ...


  • Primary referenceCrystal structures of the gastric proton pump., Abe K, Irie K, Nakanishi H, Suzuki H, Fujiyoshi Y, Nature. 2018 Apr;556(7700):214-218. doi: 10.1038/s41586-018-0003-8. Epub 2018 Apr, 4. PMID:29618813
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (207 Kb) [Save to disk]
  • Biological Unit Coordinates (5ylv.pdb1.gz) 200 Kb
  • LPC: Ligand-Protein Contacts for 5YLV
  • CSU: Contacts of Structural Units for 5YLV
  • Structure Factors (1991 Kb)
  • Retrieve 5YLV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YLV from S2C, [Save to disk]
  • View 5YLV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5ylv_A] [5ylv_B]
  • SWISS-PROT database:

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