5YTS date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA., Yang XJ, Zhu H, Mu SR, Wei WJ, Yuan X, Wang M, Liu Y, Hui J, Huang Y, J Biol Chem. 2019 Jun 3. pii: RA119.007545. doi: 10.1074/jbc.RA119.007545. PMID:31160337
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (20 Kb) [Save to disk]
  • Biological Unit Coordinates (5yts.pdb1.gz) 15 Kb
  • LPC: Ligand-Protein Contacts for 5YTS
  • CSU: Contacts of Structural Units for 5YTS
  • Structure Factors (61 Kb)
  • Retrieve 5YTS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5YTS from S2C, [Save to disk]
  • View 5YTS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5yts_A] [5yts_B]
  • SWISS-PROT database:

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