5Z48 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand DMS, NA, PCA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structures of pyrrolidone-carboxylate peptidase I from Deinococcus radiodurans reveal the mechanism of L-pyroglutamate recognition., Agrawal R, Singh R, Kumar A, Kumar A, Makde RD, Acta Crystallogr D Struct Biol. 2019 Mar 1;75(Pt 3):308-316. doi:, 10.1107/S2059798319000676. Epub 2019 Feb 28. PMID:30950401
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (145 Kb) [Save to disk]
  • Biological Unit Coordinates (5z48.pdb1.gz) 274 Kb
  • LPC: Ligand-Protein Contacts for 5Z48
  • CSU: Contacts of Structural Units for 5Z48
  • Structure Factors (2695 Kb)
  • Retrieve 5Z48 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5Z48 from S2C, [Save to disk]
  • View 5Z48 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5z48_A] [5z48_B]
  • SWISS-PROT database:

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science