5ZCQ date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AZI, CDL, CHD, CU, CUA, DMU, EDO, FME, HEA, MG, NA, PEK, PGV, PSC, SAC, TGL, TPO, UNX, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, N


B, O
  • cytochrome-c oxidase activit...


    • C, P
  • cytochrome-c oxidase activit...
  • oxidoreduction-driven active...


    • E, R


    H, U


    I, V
  • cytochrome-c oxidase activit...


    • Q, D


    S, F


    T, G


    W, J


    X, K


    Y, L


    Z, M


    Primary referenceX-ray structural analyses of azide-bound cytochrome c oxidases reveal that the H-pathway is critically important for the proton-pumping activity., Shimada A, Hatano K, Tadehara H, Yano N, Shinzawa-Itoh K, Yamashita E, Muramoto K, Tsukihara T, Yoshikawa S, J Biol Chem. 2018 Aug 3. pii: RA118.003123. doi: 10.1074/jbc.RA118.003123. PMID:30077971
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1345 Kb) [Save to disk]
  • Biological Unit Coordinates (5zcq.pdb1.gz) 663 Kb
  • Biological Unit Coordinates (5zcq.pdb2.gz) 666 Kb
  • LPC: Ligand-Protein Contacts for 5ZCQ
  • CSU: Contacts of Structural Units for 5ZCQ
  • Structure Factors (10141 Kb)
  • Retrieve 5ZCQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ZCQ from S2C, [Save to disk]
    • View 5ZCQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5zcq_A] [5zcq_B] [5zcq_C] [5zcq_D] [5zcq_E] [5zcq_F] [5zcq_G] [5zcq_H] [5zcq_I] [5zcq_J] [5zcq_K] [5zcq_L] [5zcq_M] [5zcq_N] [5zcq_O] [5zcq_P] [5zcq_Q] [5zcq_R] [5zcq_S] [5zcq_T] [5zcq_U] [5zcq_V] [5zcq_W] [5zcq_X] [5zcq_Y] [5zcq_Z]
  • SWISS-PROT database:

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science