5ZDZ | Dna Binding Protein | date | Feb 25, 2018 |
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title | Hairpin Forming Complex, Rag12-Nicked 12rss23rss Complex I | ||||||||||||||||||
authors | M.S.Kim, W.Chuenchor, X.Chen, M.Gellert, W.Yang | ||||||||||||||||||
compound | source | ||||||||||||||||||
Molecule: Mouse Rag1 Chain: A, C Fragment: Unp Residues 384-1008 Synonym: Rag-1 Ec: 3.1.-.-,2.3.2.27 Engineered: Yes |
Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Rag1 Expression_system: Homo Sapiens Expression_system_taxid: 9606 Expression_system_cell_line: Hek293t | ||||||||||||||||||
Molecule: Mouse Rag2 Chain: B, D Fragment: Unp Residues 1-387 Synonym: Rag-2 Engineered: Yes Mutation: Yes |
Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Rag2, Rag-2 Expression_system: Homo Sapiens Expression_system_taxid: 9606 Expression_system_cell_line: Hek293t | ||||||||||||||||||
Molecule: Hmgb1 A-B Box Chain: N Fragment: Unp Residues 1-163 Synonym: High Mobility Group Protein 1,Hmg-1 Engineered: Yes |
Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Gene: Hmgb1, Hmg-1, Hmg1 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||||||
Molecule: Dna (5'-D(Tpaptpcptpgpgpcpcptpgptpcp 3'); Chain: F Engineered: Yes |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||||||
Molecule: Dna (54-Mer) Chain: I Engineered: Yes |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||||||
Molecule: Dna (30-Mer) Chain: J Engineered: Yes |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||||||
Molecule: Dna (39-Mer) Chain: G Engineered: Yes |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||||||
Molecule: Dna Chain L Chain: L Engineered: Yes |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||||||
Molecule: Dna Chain M Chain: M Engineered: Yes |
Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630 | ||||||||||||||||||
symmetry | Space Group: P 1 21 1 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 2.80 Å | ||||||||||||||||
ligand | CA, EDO, K, ZN | enzyme | Hydrolase E.C.3.1 BRENDA | ||||||||||||||||
Gene Ontology |
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Primary reference | Cracking the DNA Code for V(D)J Recombination., Kim MS, Chuenchor W, Chen X, Cui Y, Zhang X, Zhou ZH, Gellert M, Yang W, Mol Cell. 2018 Apr 19;70(2):358-370.e4. doi: 10.1016/j.molcel.2018.03.008. Epub, 2018 Apr 5. PMID:29628308 |
Data retrieval |
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OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science |