5ZYQ	Transcription	date	May 28, 2018
title	The Structure Of Human Paf1ctr9 Complex
authors	Y.Xie, M.Zheng, H.Zhou, J.Long
compound		source
Molecule: Rna Polymerase-Associated Protein Ctr9 Homolog,Rn Polymerase II-Associated Factor 1 Homolog; Chain: A Synonym: Sh2 Domain-Binding Protein 1,Hpaf1,Pancreatic Differentiation Protein 2; Engineered: Yes Other_details: Fusion Protein Of Residues 1-249 From Protei Q6pd62) And Residues 57-116 From Paf1 (Rna Polymerase II-As Factor 1 Homolog, Unp Q8n7h5)		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ctr9, Kiaa0155, Sh2bp1, Paf1, Pd2 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)
symmetry	Space Group: P 31 1 2	R_factor 0.202 R_Free 0.240
crystal cell	length a length b length c angle alpha angle beta angle gamma 82.415 82.415 145.660 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.53 Å
Gene Ontology	Chain Function Process Component A
Primary reference	Paf1 and Ctr9 subcomplex formation is essential for Paf1 complex assembly and functional regulation., Xie Y, Zheng M, Chu X, Chen Y, Xu H, Wang J, Zhou H, Long J, Nat Commun. 2018 Sep 18;9(1):3795. doi: 10.1038/s41467-018-06237-7. PMID:30228257

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (104 Kb) [Save to disk] Biological Unit Coordinates (5zyq.pdb1.gz) 99 Kb CSU: Contacts of Structural Units for 5ZYQ Structure Factors (267 Kb) Retrieve 5ZYQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 5ZYQ from S2C, [Save to disk]

View 5ZYQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 5ZYQ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [5zyq_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 5ZYQ

Community annotation for 5ZYQ at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---