5ZZR Flavoprotein date Jun 04, 2018
title The Crystal Structure Of Mandelate Oxidase With (S)-Mandelic
authors T.L.Li, K.H.Lin
compound source
Molecule: 4-Hydroxymandelate Oxidase
Chain: A
Ec: 1.1.3.46
Engineered: Yes
Organism_scientific: Amycolatopsis Orientalis
Organism_common: Nocardia Orientalis
Organism_taxid: 31958
Gene: Hmo
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 4 2 2
R_factor 0.166 R_Free 0.177
crystal
cell
length a length b length c angle alpha angle beta angle gamma
137.702 137.702 111.621 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.31 Å
ligand FMN, SMN enzyme Oxidoreductase E.C.1.1.3.46 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (5zzr.pdb1.gz) 240 Kb
  • LPC: Ligand-Protein Contacts for 5ZZR
  • CSU: Contacts of Structural Units for 5ZZR
  • Structure Factors (2011 Kb)
  • Retrieve 5ZZR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 5ZZR from S2C, [Save to disk]
  • View 5ZZR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 5ZZR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [5zzr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 5ZZR
  • Community annotation for 5ZZR at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science