6AFY		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	1PG, K, MG, PO4	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Roles of the Hydrophobic Gate and Exit Channel in Vigna radiata Pyrophosphatase Ion Translocation., Tsai JY, Tang KZ, Li KM, Hsu BL, Chiang YW, Goldman A, Sun YJ, J Mol Biol. 2019 Apr 5;431(8):1619-1632. doi: 10.1016/j.jmb.2019.03.009. Epub, 2019 Mar 13. PMID:30878480

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (232 Kb) [Save to disk] Biological Unit Coordinates (6afy.pdb1.gz) 224 Kb LPC: Ligand-Protein Contacts for 6AFY CSU: Contacts of Structural Units for 6AFY Structure Factors (838 Kb) Retrieve 6AFY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6AFY from S2C, [Save to disk]

View 6AFY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6afy_A] [6afy_B] SWISS-PROT database:

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