6AU8 Chaperone date Aug 31, 2017
title 1.8 Angstrom Crystal Structure Of The Human Bag6-Nls & Trc35
authors J.Y.Mock, W.M.Clemons Jr.
compound source
Molecule: Golgi To Er Traffic Protein 4 Homolog
Chain: A
Fragment: Unp Residues 23-305
Synonym: Conserved Edge-Expressed Protein,Transmembrane Dom Recognition Complex 35 Kda Subunit,Trc35;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Get4, C7orf20, Cee, Trc35, Cgi-20
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Large Proline-Rich Protein Bag6
Chain: C
Fragment: Unp Residues 1008-1050
Synonym: Bag Family Molecular Chaperone Regulator 6,Bcl2-As Athanogene 6,Bag-6,Hla-B-Associated Transcript 3,Protein G3 Scythe;
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Bag6, Bat3, G3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.159 R_Free 0.202
crystal
cell
length a length b length c angle alpha angle beta angle gamma
41.660 84.560 102.580 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for regulation of the nucleo-cytoplasmic distribution of Bag6 by TRC35., Mock JY, Xu Y, Ye Y, Clemons WM Jr, Proc Natl Acad Sci U S A. 2017 Oct 17. pii: 201702940. doi:, 10.1073/pnas.1702940114. PMID:29042515
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (6au8.pdb1.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 6AU8
  • CSU: Contacts of Structural Units for 6AU8
  • Structure Factors (269 Kb)
  • Retrieve 6AU8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6AU8 from S2C, [Save to disk]
  • View 6AU8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6AU8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6au8_C] [6au8_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6AU8
  • Community annotation for 6AU8 at PDBWiki (http://pdbwiki.org)

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