6B3D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand EDO, EPE, GOL, IPA, MAN, PCA enzyme
Primary referenceBacterially derived synthetic mimetics of mammalian oligomannose prime antibody responses that neutralize HIV infectivity., Pantophlet R, Trattnig N, Murrell S, Lu N, Chau D, Rempel C, Wilson IA, Kosma P, Nat Commun. 2017 Nov 17;8(1):1601. doi: 10.1038/s41467-017-01640-y. PMID:29150603
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (6b3d.pdb1.gz) 143 Kb
  • LPC: Ligand-Protein Contacts for 6B3D
  • CSU: Contacts of Structural Units for 6B3D
  • Structure Factors (554 Kb)
  • Retrieve 6B3D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6B3D from S2C, [Save to disk]
  • View 6B3D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6b3d_H] [6b3d_L]
  • SWISS-PROT database:

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