6BHE	Transferase	date	Oct 30, 2017
title	Crystal Structure Of Setdb1 With A Modified H3 Peptide
authors	S.Qin, W.Tempel, C.Bountra, C.H.Arrowsmith, A.M.Edwards, J.Min, St Genomics Consortium (Sgc)
compound		source
Molecule: Histone-Lysine N-Methyltransferase Setdb1 Chain: A Fragment: Unp Residues 190-410 Synonym: Erg-Associated Protein With Set Domain, Eset, Hist Methyltransferase 4, H3-K9-Hmtase 4, Lysine N-Methyltransfe Set Domain Bifurcated 1; Ec: 2.1.1.43 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Setdb1, Kiaa0067, Kmt1e Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)-V2r-Prare2 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet28-Mhl
Molecule: Histone H3.1 Chain: B Synonym: Histone H3a, Histone H3b, Histone H3c, Histone Histone H3f, Histone H3h, Histone H3i, Histone H3j, His Histone H3l; Engineered: Yes		Synthetic: Yes Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
symmetry	Space Group: P 1 21 1	R_factor 0.135 R_Free 0.173
crystal cell	length a length b length c angle alpha angle beta angle gamma 37.051 71.372 52.055 90.00 104.23 90.00
method	X-Ray Diffraction	resolution	1.35 Å
ligand	ALY, M3L, UNX	enzyme	Transferase E.C.2.1.1.43 BRENDA
Primary reference	H3K14ac is linked to methylation of H3K9 by the triple Tudor domain of SETDB1., Jurkowska RZ, Qin S, Kungulovski G, Tempel W, Liu Y, Bashtrykov P, Stiefelmaier J, Jurkowski TP, Kudithipudi S, Weirich S, Tamas R, Wu H, Dombrovski L, Loppnau P, Reinhardt R, Min J, Jeltsch A, Nat Commun. 2017 Dec 12;8(1):2057. doi: 10.1038/s41467-017-02259-9. PMID:29234025

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (90 Kb) [Save to disk] Biological Unit Coordinates (6bhe.pdb1.gz) 84 Kb LPC: Ligand-Protein Contacts for 6BHE CSU: Contacts of Structural Units for 6BHE Structure Factors (5055 Kb) Retrieve 6BHE in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6BHE from S2C, [Save to disk]

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Structure-derived information

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Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6bhe_A] [6bhe_B] SWISS-PROT database: Domain organization of by SWISSPFAM

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