6BMU Hydrolase Hydrolase Inhibitor date Nov 15, 2017
title Non-Receptor Protein Tyrosine Phosphatase Shp2 In Complex Wi Allosteric Inhibitors Shp099 And Shp244
authors T.Stams, M.Fodor
compound source
Molecule: Tyrosine-Protein Phosphatase Non-Receptor Type 11
Chain: A, B
Synonym: Protein-Tyrosine Phosphatase 1d,Ptp-1d,Protein-Tyr Phosphatase 2c,Ptp-2c,Sh-Ptp2,Shp2,Sh-Ptp3;
Ec: 3.1.3.48
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ptpn11, Ptp2c, Shptp2
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.181 R_Free 0.225
crystal
cell
length a length b length c angle alpha angle beta angle gamma
46.130 213.450 55.940 90.00 96.75 90.00
method X-Ray Diffractionresolution 2.12 Å
ligand 5OD, DZV, GOL, PO4 enzyme Hydrolase E.C.3.1.3.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDual Allosteric Inhibition of SHP2 Phosphatase., Fodor M, Price E, Wang P, Lu H, Argintaru A, Chen Z, Glick M, Hao HX, Kato M, Koenig R, LaRochelle JR, Liu G, McNeill E, Majumdar D, Nishiguchi GA, Perez LB, Paris G, Quinn CM, Ramsey T, Sendzik M, Shultz MD, Williams SL, Stams T, Blacklow SC, Acker MG, LaMarche MJ, ACS Chem Biol. 2018 Jan 5. doi: 10.1021/acschembio.7b00980. PMID:29304282
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (172 Kb) [Save to disk]
  • Biological Unit Coordinates (6bmu.pdb1.gz) 85 Kb
  • Biological Unit Coordinates (6bmu.pdb2.gz) 85 Kb
  • LPC: Ligand-Protein Contacts for 6BMU
  • CSU: Contacts of Structural Units for 6BMU
  • Structure Factors (2026 Kb)
  • Retrieve 6BMU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6BMU from S2C, [Save to disk]
  • View 6BMU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6BMU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6bmu_A] [6bmu_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6BMU
  • Community annotation for 6BMU at PDBWiki (http://pdbwiki.org)

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