6C0W Cryo-EM structure of human kinetochore protein CENP-N with the centromeric nucleosome containing CENP-A date
authors Zhou, K., Pentakota, S., Vetter, I.R., Morgan, G.P., Petrovic, A., Musacchio, A., Luger, K.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 4.00
Gene
Ontology
ChainFunctionProcessComponent
A, E


C, G


F, B


H, D


K


Primary referenceDecoding the centromeric nucleosome through CENP-N., Pentakota S, Zhou K, Smith C, Maffini S, Petrovic A, Morgan GP, Weir JR, Vetter IR, Musacchio A, Luger K, Elife. 2017 Dec 27;6. doi: 10.7554/eLife.33442. PMID:29280735
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (241 Kb) [Save to disk]
  • Biological Unit Coordinates (6c0w.pdb1.gz) 235 Kb
  • CSU: Contacts of Structural Units for 6C0W
  • Retrieve 6C0W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6C0W from S2C, [Save to disk]
  • View 6C0W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6C0W
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 6c0w from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6c0w_G] [6c0w_J] [6c0w_C] [6c0w_K] [6c0w_A] [6c0w_F] [6c0w_H] [6c0w_D] [6c0w_I] [6c0w_E] [6c0w_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6C0W
  • Community annotation for 6C0W at PDBWiki (http://pdbwiki.org)

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