6CHI Oxidoreductase Oxidoreductase Inhibitor date Feb 22, 2018
title Human Cytochrome P450 17a1 In Complex With Inhibitor: Abirat Amide
authors E.E.Scott
compound source
Molecule: Steroid 17-Alpha-Hydroxylase17,20 Lyase
Chain: A, B, C, D
Fragment: Residues 24-508
Synonym: 17-Alpha-Hydroxyprogesterone Aldolase,Cypxvii,Cyto P450 17a1,Cytochrome P450-C17,Cytochrome P450c17,Steroid 17 Monooxygenase;
Ec: 1.14.14.19,1.14.14.32
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cyp17a1, Cyp17, S17ah
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.187 R_Free 0.242
crystal
cell
length a length b length c angle alpha angle beta angle gamma
89.424 154.108 167.891 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand 3NX, HEM enzyme Oxidoreductase E.C.1.14.14.19 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructure-Based Design of Inhibitors with Improved Selectivity for Steroidogenic Cytochrome P450 17A1 over Cytochrome P450 21A2., Fehl C, Vogt CD, Yadav R, Li K, Scott EE, Aube J, J Med Chem. 2018 May 24. doi: 10.1021/acs.jmedchem.8b00419. PMID:29792703
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (587 Kb) [Save to disk]
  • Biological Unit Coordinates (6chi.pdb1.gz) 147 Kb
  • Biological Unit Coordinates (6chi.pdb2.gz) 147 Kb
  • Biological Unit Coordinates (6chi.pdb3.gz) 150 Kb
  • Biological Unit Coordinates (6chi.pdb4.gz) 148 Kb
  • LPC: Ligand-Protein Contacts for 6CHI
  • CSU: Contacts of Structural Units for 6CHI
  • Structure Factors (2910 Kb)
  • Retrieve 6CHI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6CHI from S2C, [Save to disk]
  • View 6CHI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6CHI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6chi_A] [6chi_C] [6chi_B] [6chi_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6CHI
  • Community annotation for 6CHI at PDBWiki (http://pdbwiki.org)

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