6COA Plant Protein date Mar 12, 2018
title 1.2 A Structure Of Thaumatin Crystallized In Gel
authors C.Sauter, B.Lorber, I.G.Shabalin, P.J.Porebski, D.Brzezinski, R.G
compound source
Molecule: Thaumatin-1
Chain: A
Synonym: Thaumatin I
Organism_scientific: Thaumatococcus Daniellii
Organism_common: Katemfe
Organism_taxid: 4621
symmetry Space Group: P 41 21 2
R_factor 0.103 R_Free 0.117
crystal
cell
length a length b length c angle alpha angle beta angle gamma
58.530 58.530 151.350 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.20 Å
ligand TLA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTowards atomic resolution with crystals grown in gel: the case of thaumatin seen at room temperature., Sauter C, Lorber B, Giege R, Proteins. 2002 Aug 1;48(2):146-50. PMID:12112683
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (6coa.pdb1.gz) 75 Kb
  • LPC: Ligand-Protein Contacts for 6COA
  • CSU: Contacts of Structural Units for 6COA
  • Structure Factors (1773 Kb)
  • Retrieve 6COA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6COA from S2C, [Save to disk]
  • View 6COA in 3D
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  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6COA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6coa_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6COA
  • Community annotation for 6COA at PDBWiki (http://pdbwiki.org)

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