6D48
Immune System
date
Apr 17, 2018
title
Cell Surface Receptor
authors
S.J.Hermans, L.A.Miles, M.W.Parker
compound
source
Molecule
: Myeloid Cell Surface Antigen Cd33
Chain
: E, F, G, H
Synonym
: Sialic Acid-Binding Ig-Like Lectin 3,Siglec-3,Gp67
Engineered
: Yes
Organism_scientific
: Homo Sapiens
Organism_common
: Human
Organism_taxid
: 9606
Gene
: Cd33, Siglec3
Expression_system
: Escherichia Coli
Expression_system_taxid
: 562
symmetry
Space Group
: P 1 21 1
R_factor
0.176
R_Free
0.212
crystal
cell
length a
length b
length c
angle alpha
angle beta
angle gamma
60.801
41.543
107.498
90.00
96.55
90.00
method
X-Ray Diffraction
resolution
1.78 Å
Data retrieval
Asymmetric unit, PDB entry:
[header only]
[complete with coordinates]
(166 Kb)
[Save to disk]
Biological Unit Coordinates
(6d48.pdb1.gz) 42 Kb
Biological Unit Coordinates
(6d48.pdb2.gz) 42 Kb
Biological Unit Coordinates
(6d48.pdb3.gz) 42 Kb
Biological Unit Coordinates
(6d48.pdb4.gz) 41 Kb
CSU:
Contacts of Structural Units
for 6D48
Structure Factors
(2262 Kb)
Retrieve 6D48 in
mmCIF
format
[Save to disk]
SEQRES to COORDINATES
correlation for
6D48
from
S2C
,
[Save to disk]
View 6D48 in 3D
Proteopedia
, because life has more than 2D.
On
Jmol
, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
On
FirstGlance
, an excellent tool for a guided tour on the structure components, by
E. Martz
.
Visual 3D analysis of 6D48
Ramachandran
plot from
PDBSum
Structure-derived information
Dipole
moment, from
Dipole Server
at Weizmann Institute
Sequence-derived information
View one-letter amino acid or nucleotide sequence for each chain:
[6d48_E]
[6d48_G]
[6d48_H]
[6d48_F]
SWISS-PROT
database:
Domain
organization of by
SWISSPFAM
Other resources with information on 6D48
Community annotation for
6D48
at
PDBWiki
(http://pdbwiki.org)
You may enter another PDB ID code
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