6D5A		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	PG4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Structural Basis for the Interaction and Processing of beta-Lactam Antibiotics by l,d-Transpeptidase 3 (LdtMt3) from Mycobacterium tuberculosis., Libreros-Zuniga GA, Dos Santos Silva C, Salgado Ferreira R, Dias MVB, ACS Infect Dis. 2019 Feb 8;5(2):260-271. doi: 10.1021/acsinfecdis.8b00244. Epub, 2018 Dec 28. PMID:30556998

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk] Biological Unit Coordinates (6d5a.pdb1.gz) 114 Kb LPC: Ligand-Protein Contacts for 6D5A CSU: Contacts of Structural Units for 6D5A Structure Factors (161 Kb) Retrieve 6D5A in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6D5A from S2C, [Save to disk]

View 6D5A in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6d5a_A] SWISS-PROT database:

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