6D7W Cryo-EM structure of the mitochondrial calcium uniporter from N. fischeri at 3.8 Angstrom resolution date
authors Nguyen, N.X., Armache, J.P., Cheng, Y., Bai, X.C.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.80
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceCryo-EM structure of a fungal mitochondrial calcium uniporter., Nguyen NX, Armache JP, Lee C, Yang Y, Zeng W, Mootha VK, Cheng Y, Bai XC, Jiang Y, Nature. 2018 Jul 11. pii: 10.1038/s41586-018-0333-6. doi:, 10.1038/s41586-018-0333-6. PMID:29995855
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (171 Kb) [Save to disk]
  • Biological Unit Coordinates (6d7w.pdb1.gz) 165 Kb
  • LPC: Ligand-Protein Contacts for 6D7W
  • CSU: Contacts of Structural Units for 6D7W
  • Retrieve 6D7W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6D7W from S2C, [Save to disk]
  • View 6D7W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6D7W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6d7w_A] [6d7w_B] [6d7w_D] [6d7w_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6D7W
  • Community annotation for 6D7W at PDBWiki (http://pdbwiki.org)

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