6DDI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 03S, EDO, G7V, SO4 enzyme
Primary referenceBromodomain-Selective BET Inhibitors Are Potent Antitumor Agents against MYC-Driven Pediatric Cancer., Slavish PJ, Chi L, Yun MK, Tsurkan L, Martinez NE, Jonchere B, Chai SC, Connelly M, Waddell MB, Das S, Neale G, Li Z, Shadrick WR, Olsen RR, Freeman KW, Low JA, Price JE, Young BM, Bharatham N, Boyd VA, Yang J, Lee RE, Morfouace M, Roussel MF, Chen T, Savic D, Guy RK, White SW, Shelat AA, Potter PM, Cancer Res. 2020 Sep 1;80(17):3507-3518. doi: 10.1158/0008-5472.CAN-19-3934. Epub, 2020 Jul 10. PMID:32651255
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (125 Kb) [Save to disk]
  • Biological Unit Coordinates (6ddi.pdb1.gz) 82 Kb
  • Biological Unit Coordinates (6ddi.pdb2.gz) 78 Kb
  • LPC: Ligand-Protein Contacts for 6DDI
  • CSU: Contacts of Structural Units for 6DDI
  • Structure Factors (525 Kb)
  • Retrieve 6DDI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6DDI from S2C, [Save to disk]
  • View 6DDI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ddi_A] [6ddi_B] [6ddi_C]
  • SWISS-PROT database:

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