6DN8 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACT, CY3, GZJ, SO4 enzyme
Primary referenceA Cyclic Peptide Inhibitor of the iNOS-SPSB Protein-Protein Interaction as a Potential Anti-Infective Agent., Sadek MM, Barlow N, Leung EWW, Williams-Noonan BJ, Yap BK, Shariff FM, Caradoc-Davies TT, Nicholson SE, Chalmers DK, Thompson PE, Law RHP, Norton RS, ACS Chem Biol. 2018 Oct 19;13(10):2930-2938. doi: 10.1021/acschembio.8b00561., Epub 2018 Sep 18. PMID:30226743
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (208 Kb) [Save to disk]
  • Biological Unit Coordinates (6dn8.pdb1.gz) 67 Kb
  • Biological Unit Coordinates (6dn8.pdb2.gz) 69 Kb
  • Biological Unit Coordinates (6dn8.pdb3.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 6DN8
  • CSU: Contacts of Structural Units for 6DN8
  • Structure Factors (2187 Kb)
  • Retrieve 6DN8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6DN8 from S2C, [Save to disk]
    • View 6DN8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6dn8_A] [6dn8_B] [6dn8_C] [6dn8_D] [6dn8_E] [6dn8_F]
  • SWISS-PROT database:

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