6DPX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand H7G enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceUltra-large library docking for discovering new chemotypes., Lyu J, Wang S, Balius TE, Singh I, Levit A, Moroz YS, O'Meara MJ, Che T, Algaa E, Tolmachova K, Tolmachev AA, Shoichet BK, Roth BL, Irwin JJ, Nature. 2019 Feb;566(7743):224-229. doi: 10.1038/s41586-019-0917-9. Epub 2019 Feb, 6. PMID:30728502
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (121 Kb) [Save to disk]
  • Biological Unit Coordinates (6dpx.pdb1.gz) 59 Kb
  • Biological Unit Coordinates (6dpx.pdb2.gz) 60 Kb
  • LPC: Ligand-Protein Contacts for 6DPX
  • CSU: Contacts of Structural Units for 6DPX
  • Structure Factors (2691 Kb)
  • Retrieve 6DPX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6DPX from S2C, [Save to disk]
  • View 6DPX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6dpx_A] [6dpx_B]
  • SWISS-PROT database:

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