6DVD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	ZN	enzyme
Gene Ontology	Chain Function Process Component A, B C D E F bacterial sigma factor activ...
Primary reference	Structural basis of ECF-sigma-factor-dependent transcription initiation., Lin W, Mandal S, Degen D, Cho MS, Feng Y, Das K, Ebright RH, Nat Commun. 2019 Feb 12;10(1):710. doi: 10.1038/s41467-019-08443-3. PMID:30755604

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (504 Kb) [Save to disk] Biological Unit Coordinates (6dvd.pdb1.gz) 496 Kb LPC: Ligand-Protein Contacts for 6DVD CSU: Contacts of Structural Units for 6DVD Structure Factors (295 Kb) Retrieve 6DVD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6DVD from S2C, [Save to disk]

View 6DVD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6dvd_A] [6dvd_B] [6dvd_C] [6dvd_D] [6dvd_E] [6dvd_F] [6dvd_G] [6dvd_H] SWISS-PROT database:

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