6E86 Gene Regulation date Jul 27, 2018
title Solution Structure Of Zzz3 Zz Domain In Complex With Histone Peptide
authors Y.Zhang, T.G.Kutateladze
compound source
Molecule: Zz-Type Zinc Finger-Containing Protein 3
Chain: B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Zzz3
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: H3k4ac
Chain: A
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_taxid: 9606
methodSolution NMR
ligand ALY, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceThe ZZ-type zinc finger of ZZZ3 modulates the ATAC complex-mediated histone acetylation and gene activation., Mi W, Zhang Y, Lyu J, Wang X, Tong Q, Peng D, Xue Y, Tencer AH, Wen H, Li W, Kutateladze TG, Shi X, Nat Commun. 2018 Sep 14;9(1):3759. doi: 10.1038/s41467-018-06247-5. PMID:30217978
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (363 Kb) [Save to disk]
  • Biological Unit Coordinates (6e86.pdb1.gz) 19 Kb
  • LPC: Ligand-Protein Contacts for 6E86
  • CSU: Contacts of Structural Units for 6E86
  • Original NMR restraints for 6E86 from PDB
  • Retrieve 6E86 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6E86 from S2C, [Save to disk]
  • View 6E86 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6E86
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6e86_B] [6e86_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6E86
  • Community annotation for 6E86 at PDBWiki (http://pdbwiki.org)

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