6EBG Oxidoreductase date Aug 06, 2018
title Ohr (Organic Hydroperoxide Resistance Protein) Mutant - C60s Interacting With Dihydrolipoamide
authors R.M.Domingos, R.D.Teixeira, T.G.P.Alegria, P.S.Vieira, M.T.Murak L.E.S.Netto
compound source
Molecule: Organic Hydroperoxide Resistance Protein
Chain: A, B, C, D
Engineered: Yes
Mutation: Yes
 Organism_scientific: Chromobacterium Violaceum
Organism_taxid: 536
Gene: Cbw21_15220
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: P 61
R_factor 0.201 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
88.646 88.646 180.107 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.15 Å
ligand J3S enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (182 Kb) [Save to disk]
  • Biological Unit Coordinates (6ebg.pdb1.gz) 89 Kb
  • Biological Unit Coordinates (6ebg.pdb2.gz) 89 Kb
  • LPC: Ligand-Protein Contacts for 6EBG
  • CSU: Contacts of Structural Units for 6EBG
  • Structure Factors (1196 Kb)
  • Retrieve 6EBG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6EBG from S2C, [Save to disk]
    • View 6EBG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6EBG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ebg_C] [6ebg_B] [6ebg_D] [6ebg_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6EBG
  • Community annotation for 6EBG at PDBWiki (http://pdbwiki.org)

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