6EC0 Protein Fibril date Aug 07, 2018
title Crystal Structure Of The Wild-Type Heterocomplex Between Coi Domains Of Human Intermediate Filament Proteins Keratin 1 ( Keratin 10 (Krt10)
authors S.A.Eldirany, I.B.Lomakin, C.G.Bunick
compound source
Molecule: Keratin 1
Chain: A
Engineered: Yes
Other_details: Coil 1b Domain Of Human Keratin 1 (Krt1)
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Krt1
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pet

Molecule: Keratin, Type I Cytoskeletal 10
Chain: B
Synonym: Cytokeratin-10,Ck-10,Keratin-10,K10
Engineered: Yes
Other_details: Gly-Ser At N-Terminus Following His-Tag Clea 1b Domain Of Human Keratin 10 (Krt10)

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Krt10, Kpp
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pet
symmetry Space Group: P 31 2 1
R_factor 0.281 R_Free 0.300
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.685 106.685 70.321 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.98 Å
ligand CD, CO, NI enzyme
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceHuman keratin 1/10-1B tetramer structures reveal a knob-pocket mechanism in intermediate filament assembly., Eldirany SA, Ho M, Hinbest AJ, Lomakin IB, Bunick CG, EMBO J. 2019 Apr 29. pii: embj.2018100741. doi: 10.15252/embj.2018100741. PMID:31036554
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk]
  • Biological Unit Coordinates (6ec0.pdb1.gz) 217 Kb
  • LPC: Ligand-Protein Contacts for 6EC0
  • CSU: Contacts of Structural Units for 6EC0
  • Structure Factors (117 Kb)
  • Retrieve 6EC0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6EC0 from S2C, [Save to disk]
  • View 6EC0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6EC0
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6ec0_B] [6ec0_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6EC0
  • Community annotation for 6EC0 at PDBWiki (http://pdbwiki.org)

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